BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C12SP1|AL428705
(850 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1807 736 0.0
3x_Contig1094 629 e-180
>3x_Contig1807
Length = 66587
Score = 736 bits (371), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Plus
Query: 1 cgtatacttacccagatcatgaacttttgattggaaaaatcgcacataaaattgggtttw 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66110 cgtatacttacccagatcatgaacttttgattggaaaaatcgcacataaaattgggttta 66169
Query: 61 agcacgtttcgttgtcttcccaggtctctccaatgatcaagtttttacctagagcacata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66170 agcacgtttcgttgtcttcccaggtctctccaatgatcaagtttttacctagagcacata 66229
Query: 121 gttcagtcgctgatgcttatttgactccggtaattaagaaatacctcgaaagtatcgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66230 gttcagtcgctgatgcttatttgactccggtaattaagaaatacctcgaaagtatcgaat 66289
Query: 181 ctgggttaactaatgctgaaaatacaaacgttcaattcatgcaatcagatgggggtttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66290 ctgggttaactaatgctgaaaatacaaacgttcaattcatgcaatcagatgggggtttgg 66349
Query: 241 tagatgggaaaaaattctctgggttaaaatctatcttatcaggtccagctggtggtgttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66350 tagatgggaaaaaattctctgggttaaaatctatcttatcaggtccagctggtggtgttg 66409
Query: 301 tcggatattcatctacttgttacgatgatgaaaataggatccccttgattggttttgata 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 66410 tcggatattcatctacttgttacgatgatgaaaatacgatccccttgattggttttgata 66469
Query: 361 tgggtggtacttctacc 377
|||||||||||||||||
Sbjct: 66470 tgggtggtacttctacc 66486
>3x_Contig1094
Length = 4859
Score = 629 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 534 gaatctgctactgctgacccaggtcctgctgcatatcgtaaaggtggtcctttgactatc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatctgctactgctgacccaggtcctgctgcatatcgtaaaggtggtcctttgactatc 60
Query: 594 actgatgccaatcttttccttggtagactcgtaccggaattcttcccaagcatctttgga 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgatgccaatcttttccttggtagactcgtaccggaattcttcccaagcatctttgga 120
Query: 654 ccaaatgaagacgaaacactagatcttgagacaactactaaactgtttttagaactcacg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaaatgaagacgaaacactagatcttgagacaactactaaactgtttttagaactcacg 180
Query: 714 gatactatcaacaaggatctaaatgccaatttcacgcccgatgaaattgcttacggtttt 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatactatcaacaaggatctaaatgccaatttcacgcccgatgaaattgcttacggtttt 240
Query: 774 ttgaaagtggccaacgaatcaatggcaagaccaattcgtgcaatcaccgaagccaaggga 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgaaagtggccaacgaatcaatggcaagaccaattcgtgcaatcaccgaagccaaggga 300
Query: 834 catgcagtacaaaacca 850
|||||||||||||||||
Sbjct: 301 catgcagtacaaaacca 317
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5863
Number of Sequences: 1807
Number of extensions: 5863
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 2
length of query: 850
length of database: 10,358,551
effective HSP length: 16
effective length of query: 834
effective length of database: 10,329,639
effective search space: 8614918926
effective search space used: 8614918926
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)